高通量测序解析云南省酸菜中乳酸菌多样性及功能特性
High-throughput sequencing analysis of the diversity and functional characteristics of lactic acid bacteria in Suancai (pickled vegetables) from Yunnan Province
投稿时间:2026-02-09  修订日期:2026-08-06
DOI:
中文关键词:  乳酸菌  多样性  功能特性  酸菜  云南省
英文关键词:Lactic Acid Bacteria  Diversity  functional characteristics  Suancai  Yunnan Province  
基金项目:云南省市场监督管理局科技计划项目(2024YSJK17)
作者单位
王 蕊 昆明市食品药品检验所昆明市食品药品检验研究院 
刁玉华 昆明市食品药品检验所昆明市食品药品检验研究院 
赵四标 昆明市食品药品检验所昆明市食品药品检验研究院 
张联琴 昆明市食品药品检验所昆明市食品药品检验研究院 
陈 娴 昆明市食品药品检验所昆明市食品药品检验研究院 
陈 艳 昆明市食品药品检验所昆明市食品药品检验研究院 
左 诚 昆明市食品药品检验所昆明市食品药品检验研究院 
万 静 昆明市食品药品检验所昆明市食品药品检验研究院 
张加稳 昆明市食品药品检验所昆明市食品药品检验研究院 
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中文摘要:
      摘 要:目的 了解云南省酸菜中乳酸菌群落结构、多样性及菌群功能。方法 采用Oxford NanoPore高通量测序技术,对云南省5个不同气候与地理区位的30份传统酸菜样本进行测序。结果 芽孢杆菌纲下,共注释到1个目,5个科,10个属、70个种。在属水平上,乳杆菌属为绝对优势菌群,其占比在66.13%~96.92%之间。其次为肠球菌属、明串珠菌属、片球菌属、魏斯氏菌属。种水平上发酵乳杆菌、消化伴生乳杆菌、德氏乳杆菌、粪肠球菌、韩国列文氏乳杆菌为优势种,且不同地区物种组成差异显著。西双版纳傣族自治州和德宏傣族景颇族自治州所代表的热带地区样本中乳酸菌多样性高于气候相对温和的昆明、曲靖和大理白族自治州地区。热带地区样本群落结构相似聚为一类,温带地区聚为另一类,表明气候条件及地理来源是影响乳酸菌群落构成的主要因子。功能预测显示,化能异养与发酵为主要能量代谢途径,各地区在硝酸盐还原、氨化、氮呼吸等功能上存在差异:大理白族自治州地区样本中,化能异养与发酵功能丰度与总酸含量正相关,均为最高;西双版纳傣族自治州和德宏傣族景颇族自治州则以硝酸盐还原功能丰度值、亚硝酸含量较高为特征;而曲靖和昆明地区亚硝酸盐氨化及氮呼吸功能丰度值较高,亚硝酸盐含量与其负相关,显著低于其地区。结论 本研究揭示了云南省不同地区酸菜中乳酸菌的群落差异、多样性与潜在功能,为后续功能性菌株的筛选及区域特色乳酸菌资源的开发与利用提供理论依据
英文摘要:
      ABSTRACT: Objective Investigate the microbial community diversity, and potential functions of the lactic acid bacteria (LAB) in these suancai. Methods high-throughput sequencing using Oxford Nanopore technology was performed on 30 traditionally suancai samples collected from five different climatic and geographical regions in Ynnan Province. Results The results revealed that within the class Bacilli, a total of 1 order, 5 families, 10 genera, and 70 species were annotated. At the genus level, Lactobacillus was the absolutely dominant genus, with its relative abundance ranging from 66.13% to 96.92%. followed by Enterococcus, Leuconostoc, Pediococcus, and Weissella. At the species level, Lactobacillus fermentum, Companilactobacillus alimentarius, Lactobacillus delbrueckii, Enterococcus faecalis, and Levilactobacillus koreensis were identified as the dominant species, with significant differences in species composition across regions. Samples from the tropical regions of Xishuangbanna Dai Autonomous Prefecture and Dehong Dai and Jingpo Autonomous Prefecture exhibited higher LAB diversity than those from the more temperate regions of Kunming, Qujing, and Dali Bai Autonomous Prefecture.Cluster analysis showed that tropical samples grouped together, while temperate samples formed a separate cluster, indicating that climate and geographical origin are major factors influencing LAB community composition. Functional prediction indicated that chemoheterotrophy and fermentation were the primary energy metabolism pathways. Regional differences were observed in functions such as nitrite reduction, ammonification, and nitrogen respiration. In the samples from Dali Bai Autonomous Prefecture, the abundance values of chemoheterotrophy and fermentation functions showed a positive correlation with the total acid content, both being the highest. In contrast, Xishuangbanna Dai Autonomous Prefecture and Dehong Dai and Jingpo Autonomous Prefecture were characterized by higher abundance values of nitrate reduction function and higher nitrite content. Meanwhile, in Qujing and Kunming areas, the abundance values of nitrite ammonification and nitrogen respiration functions were higher, and their nitrite content showed a negative correlation with these functions, being significantly lower than that in other regions. Conclusion This study reveals the community differences, diversity, and potential functions of LAB in Suan from different regions of Yunnan Province, providing a theoretical basis for the subsequent screening of functional strains and the development and utilization of regional characteristic lactic acid bacteria resources.
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